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dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa

机译:dictyBase更新2011:Web 2.0功能和变形虫基因组门户的初步步骤

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摘要

dictyBase (http://www.dictybase.org), the model organism database for Dictyostelium, aims to provide the broad biomedical research community with well integrated, high quality data and tools for Dictyostelium discoideum and related species. dictyBase houses the complete genome sequence, ESTs, and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome to provide a ‘reference genome’ in the Amoebozoa clade. We highlight several new features in the present update: (i) new annotations; (ii) improved interface with web 2.0 functionality; (iii) the initial steps towards a genome portal for the Amoebozoa; (iv) ortholog display; and (v) the complete integration of the Dicty Stock Center with dictyBase.
机译:盘基网柄菌的模型生物数据库dictyBase(http://www.dictybase.org)旨在为广泛的生物医学研究界提供用于盘基网柄菌和相关物种的高度集成的高质量数据和工具。 dictyBase包含完整的基因组序列,EST和整个与盘基网柄菌相关的文献。整理这些信息以提供准确的基因模型和功能注释,目的是完全注释基因组,以便在变形虫进化枝中提供“参考基因组”。我们在当前更新中重点介绍了几个新功能:(i)新注释; (ii)具有Web 2.0功能的改进界面; (iii)建立变形虫基因组门户的初步步骤; (iv)直系同源物展示; (v)Dicty Stock Center与dictyBase的完全集成。

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